Development Tools and Libraries
- Download Tools For Mac Os
- Download Rtools For Mac Catalina
- Download Rtools For Mac High Sierra
- Download Rtools For Mac Os
Previous tools
- Visual Studio IDE Visual Studio for Mac Visual Studio Code To continue downloading, click here Distributable Code for Microsoft Visual Studio 2013 and Microsoft Visual Studio 2013 SDK (Includes U 2018-04-18T12:42:51-07:00.
- RStudio provides free and open source tools for R and enterprise-ready professional software for data science teams to develop and share their work at scale.
Universal GNU Fortran 4.2.3 for Mac OS X 10.4 and higher. It is necessary in order to build R packages from sources that contain Fortran code. Unlike many other builds, this is a fully universal build of GNU Fortran that uses Apple's driver and supports all target architectures (i386, ppc, x8664 and ppc64). The following instructions assume that you have installed R and have installed Xcode (Mac) or Rtools (Windows); as well as Bioconductor. Alternatively, you can install from the source by hand. First download the zipped package and unzip it (or expand the tarball). Start a fresh R session, and enter the following.
The following is provided as support of older versions of R. If you use R 4.0.0 or higher, please disregard and read the top section.R 3.5.0-3.6.3 El Capitan binaries and higer were using more recent Clang compiler and GNU Fortran 6.1 to provide OpenMP parallelization support and C++17 standard features. If you want to compile R packages from sources, please download GNU Fortran binary from the official GNU Fortran Binaries page - in particular OS X 10.11 gfortran 6.1. Alternatively, we are providing a copy here as well as Clang binaries for OS X 10.11 and higher - see below for the download links.
Files:
| clang-8.0.0.pkg (OS X 10.11+, signed, 64-bit) MD5-hash: 664582b0722cb59802cb762b2ad7548b (ca. 482Mb) | Clang 8.0.0 for OS X 10.11 and higher, release build for x86_64, signed package, installs into /usr/local/clang8. To be used with El Capitan builds of R 3.7.0 and higher. It is an installer version of the official LLVM released binaries only modified to use the path above. |
| clang-7.0.0.pkg (OS X 10.11+, signed, 64-bit) MD5-hash: cef3fd2a5c165d00f9941f64ea4024f7 (ca. 463Mb) | Clang 7.0.0 for OS X 10.11 and higher, release build for x86_64, signed package, installs into /usr/local/clang7. To be used with El Capitan builds of R 3.6.x. It is an installer version of the official LLVM released binaries only modified to use the path above. |
| clang-6.0.0.pkg (OS X 10.11+, signed, 64-bit) MD5-hash: c29700c4e7b2914073ef7e741eb105bc (ca. 418Mb) | Clang 6.0.0 for OS X 10.11 and higher, static build for x86_64, signed package, installs into /usr/local/clang6. To be used with El Capitan builds of R 3.5.x. |
| gfortran-6.1.pkg (OS X 10.11+, signed, 64-bit) MD5-hash: 201026216e8b373d9cd2efc0cc474bb8 (ca. 73Mb) | GNU Fortran 6.1 for OS X 10.11 and higher - a copy from GFortranBinaries pages for x86_64, signed package, installs into /usr/local/gfortran (identical content, re-packaged to a flat Installer package and signed). To be used with El Capitan builds of R. |
| The following binaries are obsolete and only provided for historical reasons | |
| gfortran-4.2.3.pkg (OS X 10.5+, signed, 64-bit driver) MD5-hash: 8783f803038abe6487a362ad5b8995ea (ca. 27MB) gfortran-4.2.3.dmg (OS X 10.4, 32-bit driver) MD5-hash: 9551fc46f55537dd1db581154daf27ef (ca. 27MB) | Universal GNU Fortran 4.2.3 for Mac OS X 10.4 and higher. It is necessary in order to build R packages from sources that contain Fortran code. Unlike many other builds, this is a fully universal build of GNU Fortran that uses Apple's driver and supports all target architectures (i386, ppc, x86_64 and ppc64). As such it fully supports compilation into fat files like gfortran -arch i386 -arch ppc -arch x86_64 -arch ppc64 t.f -o ton both Intel Macs and PowerPC Macs (32- and 64-bit). Dependent libraries are fat as well, avoiding problems known from other Fortran builds (such as those from HPC). It installs in /usr/local and comes with an uninstall-script. |
| tcltk-8.5.5-x11.pkg (OS X 10.5+, signed) MD5-hash: e7c406d91762ffdc4539b23c5b5a3ab4 (ca. 9MB) tcltk-8.5.5-x11.dmg (OS X 10.4) MD5-hash: c32dda1b9f2c2776a02cec4e03befc76 (ca. 9MB) | Universal build of Tcl/Tk 8.5.5 for X11 (32-bit and 64-bit). This library is necessary in order to use the tcltk R package (for R 2.8.0 - 2.15.3 only!). It installs in /usr/local. Requires Mac OS X 10.4 (Tiger) or higher for 32-bit R and Mac OS X 10.5 (Leopard) or higher for 64-bit R. NOTE: R 3.0.0 and higher comes bundled with Tck/Tk 8.6.0 so you do not need this package |
For other (optional) 3rd party libraries for development see http://mac.R-project.org/libs/. The devpack has been superseded by those libraries. For R you may want to download and install libpng, libjpeg, readline, freetype, fontconfig, pixman and cairo.
Source code for all 3rd party libraries can be found at http://mac.R-project.org/src/
The dependency libraries used by the CRAN macOS build system are now managed by build recipes. Package authors wishing to add static dependendies can create a pull request to add a dependency.
Subdirectories:
| old | Previous versions of tools as supplied with legacy R versions. |
You may also want to read the R FAQ and R for Mac OS X FAQ. For discussion of Mac-related topics and reporting Mac-specific bugs, please use the R-SIG-Mac mailing list.
Download Tools For Mac Os
Information, tools and most recent daily builds of the R GUI, R-patched and R-devel can be found at http://mac.R-project.org/. Please visit that page especially during beta stages to help us test the Mac OS X binaries before final release! The page also contains links to experimental builds as such 64-bit R for OS X.
Link to corresponding sources: http://mac.R-project.org/src/
Last modified: 2020/04/24, by Simon Urbanek
Install from source
Source installation is available for R 3.4 or later, and the latest and greatest features will be available first through source installs of the development branch.
0. Install using devtools
The easiest method is to use the devtools package to install and compile directly from github:
If that worked you’re done (see step 4)! If it failed on missing dependencies, goto step 3. If devtools isn’t an option, you can also install directly from the source (goto step 1).
1. Download
Current Release (1.16): Zipped or tarball.
Development Branch (1.17): Zipped or tarball.
2. Install manually from source
The following instructions assume that you have installed R and have installed Xcode (Mac) or Rtools (Windows); as well as Bioconductor.
Alternatively, you can install from the source by hand. First download the zipped package and unzip it (or expand the tarball).
Start a fresh R session, and enter the following.
For example, if the dada2 source code directory was in ~/github/dada2, then the following would work.
Check Package Version
3. Troubleshoot Dependencies
Download Rtools For Mac Catalina
At this point, there may be complaints about missing dependencies. To install missing dependencies on either CRAN or Bioconductor, start a fresh R session, and enter the following.
For Bioconductor, start a fresh R session, and enter the following.
4. Re-attempt dada2 Installation
Install again, after dependencies have been installed.
Devtools method:
Manual install from source method:
Download Rtools For Mac High Sierra
You should now be done, if installation was successful. If not, do not panic, and post a message to the issue tracker.
5. Load Package, Explore Function Documentation
Now that the package is loaded, you can explore the documentation using the R help system.
Download Rtools For Mac Os
You are ready to use dada2!